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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs8138797 chr22:31044286 A/G SGSM3 chr22:40766595-40806293:+ 0.45 6.97 1.08E-11 Box Plot
THCA rs8138797 chr22:31044286 A/G ST13 chr22:41220539-41253026:- 0.5 6.49 2.16E-10 Box Plot
THCA rs8138797 chr22:31044286 A/G TOP3B chr22:22311397-22337213:- 0.44 6.41 3.42E-10 Box Plot
THCA rs8138797 chr22:31044286 A/G TRMT2A chr22:20099389-20104915:- 0.43 6.14 1.72E-9 Box Plot
THCA rs8138797 chr22:31044286 A/G TUBGCP6 chr22:50656118-50683421:- 0.36 5.94 5.41E-9 Box Plot
THCA rs8138797 chr22:31044286 A/G TXN2 chr22:36863083-36878077:- 0.51 7.37 7.64E-13 Box Plot
THCA rs8138797 chr22:31044286 A/G XRCC6 chr22:42017123-42060052:+ 0.48 6.29 6.97E-10 Box Plot
THCA rs8139244 chr22:27842207 C/T ANKRD54 chr22:38226862-38245334:- -0.48 -6.05 2.92E-9 Box Plot
THCA rs8139244 chr22:27842207 C/T AP1B1 chr22:29723669-29819168:- -0.62 -6.57 1.33E-10 Box Plot
THCA rs8139244 chr22:27842207 C/T ARFGAP3 chr22:43192508-43254112:- -0.54 -6.01 3.77E-9 Box Plot
THCA rs8139244 chr22:27842207 C/T BRD1 chr22:50166931-50221160:- -0.51 -5.93 5.94E-9 Box Plot
THCA rs8139244 chr22:27842207 C/T C22orf30 chr22:32072242-32146120:- -0.42 -6.08 2.44E-9 Box Plot
THCA rs8139244 chr22:27842207 C/T C22orf40 chr22:46639911-46646193:- -0.46 -6.12 1.97E-9 Box Plot
THCA rs8139244 chr22:27842207 C/T CBY1 chr22:39052641-39069859:+ -0.54 -6.62 9.84E-11 Box Plot
THCA rs8139244 chr22:27842207 C/T DDX17 chr22:38879445-38903665:- -0.51 -6.79 3.31E-11 Box Plot